Aspergillus Genomics - Aspergillus niger

1. Genome sequencing and analysis of the versatile cell
   factory Aspergillus niger CBS 513.88. NATURE BIOTECHNOLOGY 25 (2) 221-231. 2007 Herman J Pel et. al. link

   Supplementary genomic material

   1. Supplementary Figure 1. Phylogeny of filamentous fungi
   2. Supplementary Figure 2. Cell wall integrity pathway
   3. Supplementary Figure 3. Metabolic Pathways
   4. Supplementary Figure 4. Cell membrane signalling
   5. Supplementary Figure 5. Phylogeny of citrate synthases
   6. Supplementary Figure 6. Phylogeny of GH13 glycoside hydrolases
   7. Supplementary Figure 7. Putative A. niger fumonisin cluster
   8. SUPPLEMENTARY DATA
   9. Supplementary Tables
      1. Table 1. Anticodon usage of A. niger tRNA genes
      2. Table 2. A. niger codon usage
      3. Table 3. Panorthologous proteins used for phylogenetic analysis
      4. Table 4. Physical and genetic mapping of cloned A. niger genes
      5. Table 5. Genes implicated in asexual and sexual reproduction in A. niger
      6. Table 6. Genes predicted to be implicated in heterokaryon incompatibility in A. niger
      7. Table 7. A. niger CBS 513.88 gene expression
      8. Table 8. A. niger proteins involved in cell wall biosynthesis
      9. Table 9. Comparison of fungal cell wall biosynthesis genes
      10. Table 10. Metabolic model statistics
      11. Table 11. Enzymes incorporated in metabolic model but not identified in the genome
      12. Table 12. A. niger transporters
      13. Table 13. Comparison of transporter classes in different aspergilli
      14. Table 14. Comparison of number of proteins containing putative DNA binding domains
      15. Table 15. Comparison of proteins containing putative DNA binding domains
      16. Table 16. Components of the secretory pathway
      17. Table 17. A. niger carbohydrases
      18. Table 18. A. niger genes involved in proteolytic degradation
      19. Table 19. Secondary metabolism genes and gene clusters
      20. Table 20. NRPS and PKS domain structure